Revista Brasileira de Psiquiatria ISSN print 1516-4446
ISSN on-line 1809-452X
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Braz J Psychiatry 2012; 3: Volume 34; 360-363



Negligible impact of a HTR1A gene promoter variant on suicidal behavior

Philipp G. Sand

Dear Editors,

I have read with great interest the recent meta-analysis of rs6295 effects on suicidal behavior conducted by Angles et al.1 Praise to the authors for having rigorously selected eligible studies prior to embarking on their analysis. The message is clear. Unfortunately, the calculations are in error as alleles were muddled in one of the four investigations on which the random effects model was based: Lemonde et al.2 examined the transcribed DNA strand, whereas the remaining studies refer to the anti-parallel strand. When this is overlooked, G and C alleles are exchanged and the G allele becomes risk-enhancing rather than protective. Even if the data in question are dropped on the grounds of heterogeneity, I have counted four additional studies of which at least one3 warrants inclusion in the model. After correcting for these confounders, the pooled odds ratios obtained are 0.86 (0.7-1.2) and 0.97 (0.8-1.1), respectively (Figure 1). No significant association with suicidal behavior emerges which is in line with a further, more recent publication.4

Figure 1 Forest plots of odds ratios (OR) for the rs6295 G allele assuming a codominant mode of inheritance with (a) and without (b) the initial study by Lemonde et al.2

The main concern with present and past research in the field remains, however, the lack of adequate specification of genetic exposure that precludes all verifications of this kind. A growing number of studies has referred to rs6295 without providing experimental details on the DNA strand amplified and the allele actually called. Literally, such data make little sense and cannot be used for aggregating results across examinations to increase statistical power.5 It appears unlikely, therefore, that larger samples will shed more light on the role of rs6295 in candidate phenotypes unless genotyping procedures are routinely reported in full detail to help decrypt this information.

Philipp G. Sand, MD
Department of Psychiatry and Psychotherapy,
University of Regensburg, Alemanha


1. Angles MR, Ocaña DB, Medellín BC, Tovilla-Zárate C. No association between the HTR1A gene and suicidal behavior: a meta-analysis. Rev Bras Psiquiatr. 2012;34(1):38-42.

2. Lemonde S, Turecki G, Bakish D, Du L, Hrdina PD, Bown CD, Sequeira A, Kushwaha N, Morris SJ, Basak A, Ou XM, Albert PR. Impaired repression at a 5-hydroxytryptamine 1A receptor gene polymorphism associated with major depression and suicide. J Neurosci. 2003;23(25):8788-99.

3. Sawiniec J, Borkowski K, Ginalska G, Lewandowska-Stanek H. Association between 5-hydroxytryptamine 1A receptor gene polymorphism and suicidal behavior. Przegl Lek. 2007;64(4-5):208-11.

4. Judy JT, Seifuddin F, Mahon PB, Huo Y, Goes FS, Jancic D, Schweizer B, Mondimore FM, Mackinnon DF, Depaulo JR Jr, Gershon ES, McMahon FJ, Cutler DJ, Zandi PP, Potash JB, Willour VL. Association study of serotonin pathway genes in attempted suicide. Am J Med Genet B Neuropsychiatr Genet. 2012;159B(1):112-9.

5. Sand PG. A functional 5-HT1A variant and comorbid anxiety. Epilepsy Res. Feb 2012 [Epub ahead of print].

6. Serretti A, Mandelli L, Giegling I, Schneider B, Hartmann AM, Schnabel A, Maurer K, Möller HJ, Rujescu D. HTR2C and HTR1A gene variants in German and Italian suicide attempters and completers. Am J Med Genet B Neuropsychiatr Genet. 2007;144B:291-9.

7. Videtic A, Zupanc T, Pregelj P, Balazic J, Tomori M, Komel R. Suicide, stress and serotonin receptor 1A promoter polymorphism -1019C>G in Slovenian suicide victims. Eur Arch Psychiatry Clin Neurosci. 2009;259:234-8.

8. Yoon HK, Kim YK. TPH2 -703G/T SNP may have important effect on susceptibility to suicidal behavior in major depression. Prog Neuropsychopharmacol Biol Psychiatry. 2009;33:403-9.